Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs73588051 chr16:71388627 A/G 3.29E-9 279 25.78 26.83 9.68 KM Plot
KIRP rs73698941 chr7:53206623 G/A 9.71E-6 279 26.2 25.23 10.97 KM Plot
KIRP rs737693 chr11:102726142 A/T 8.11E-6 288 25.7 26.52 10.97 KM Plot
KIRP rs73829964 chr3:45219835 C/A 8.83E-6 288 25.67 26.83 17.13 KM Plot
KIRP rs73859911 chr3:99690439 G/A 3.46E-5 288 25.6 32.72 12.1 KM Plot
KIRP rs73931917 chr19:16536998 C/T 2.11E-15 285 26 21.43 8.08 KM Plot
KIRP rs73931918 chr19:16537006 C/T 2.11E-15 285 26 21.43 8.08 KM Plot
KIRP rs73971169 chr2:162008311 G/A 1.95E-12 289 26.37 21.97 8.47 KM Plot
KIRP rs73971171 chr2:162019551 T/C 1.95E-12 289 26.37 21.97 8.47 KM Plot
KIRP rs74036125 chr16:89193259 A/G 0 282 25.6 25.8 4.07 KM Plot
KIRP rs74137928 chr10:43203753 A/C 7.04E-5 288 25.23 27.75 11.43 KM Plot
KIRP rs74405933 chr6:14095755 G/A 0.000169 287 25.53 34 4.07 KM Plot
KIRP rs74418287 chr10:43183179 T/G 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs74513491 chr10:43526812 C/T 5.86E-5 289 25.62 26.52 11.43 KM Plot
KIRP rs74530485 chr17:80828281 C/T 2.81E-6 286 26.07 24.15 16.77 KM Plot